Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gspi | AM464_RS09280 | Not Available | Positive | 1766317 - 1766694 | 13902.2 |
| type ii secretion system minor pseudopilin gspj | AM464_RS09285 | Not Available | Positive | 1766687 - 1767274 | 22232.5 |
| type ii secretion system minor pseudopilin gspk | AM464_RS09290 | Not Available | Positive | 1767267 - 1768250 | 37648.7 |
| type ii secretion system protein gspl | AM464_RS09295 | Not Available | Positive | 1768265 - 1769428 | 44542.3 |
| type ii secretion system protein gspm | AM464_RS09300 | Not Available | Positive | 1769425 - 1769886 | 17262.8 |
| duf1889 family protein | AM464_RS09310 | Not Available | Positive | 1769886 - 1770562 | 24195.9 |
| bacterioferritin | AM464_RS09315 | Not Available | Negative | 1770591 - 1771067 | 18496.2 |
| bacterioferritin-associated ferredoxin | AM464_RS09320 | Not Available | Negative | 1771139 - 1771333 | 7363.04 |
| bifunctional chitinase/lysozyme | AM464_RS09325 | Not Available | Negative | 1771502 - 1774195 | 97062.3 |
| elongation factor tu | AM464_RS09335 | Not Available | Negative | 1774487 - 1775671 | 43286.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




