Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage holin family protein | AM464_RS08105 | Not Available | Positive | 1565462 - 1565866 | 15148.0 |
| yqjk-like family protein | AM464_RS08110 | Not Available | Positive | 1565856 - 1566155 | 11811.4 |
| doxx family protein | AM464_RS08115 | Not Available | Positive | 1566341 - 1566733 | 14102.8 |
| glutathionyl-hydroquinone reductase yqjg | AM464_RS08120 | Not Available | Positive | 1566803 - 1567789 | 37388.0 |
| duf805 domain-containing protein | AM464_RS08125 | Not Available | Positive | 1568083 - 1568448 | 14281.7 |
| duf1889 family protein | AM464_RS08130 | Not Available | Positive | 1568690 - 1569047 | 14301.0 |
| dna-binding transcriptional regulator yhaj | AM464_RS08140 | Not Available | Negative | 1569098 - 1569994 | 33258.3 |
| pirin family protein | AM464_RS08145 | Not Available | Positive | 1570099 - 1570800 | 25897.0 |
| protein yhal | AM464_RS08150 | Not Available | Positive | 1570823 - 1570987 | 5961.16 |
| cysteine desulfidase | AM464_RS08155 | Not Available | Negative | 1571121 - 1572431 | 45363.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




