Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AM464_RS07000 | Not Available | Negative | 1355273 - 1355932 | 24940.1 |
| abc transporter permease | AM464_RS07005 | Not Available | Negative | 1355929 - 1356705 | 29559.4 |
| gspm family type ii secretion system protein yghd | AM464_RS07010 | Not Available | Negative | 1357761 - 1358297 | 20335.6 |
| type ii secretion system protein gspl | AM464_RS07015 | Not Available | Negative | 1358299 - 1359477 | 44316.6 |
| type ii secretion system minor pseudopilin gspk | AM464_RS07020 | Not Available | Negative | 1359474 - 1360451 | 36482.2 |
| type ii secretion system minor pseudopilin gspj | AM464_RS07025 | Not Available | Negative | 1360448 - 1361053 | 22320.3 |
| type ii secretion system minor pseudopilin gspi | AM464_RS07030 | Not Available | Negative | 1361050 - 1361421 | 13652.3 |
| type ii secretion system minor pseudopilin gsph | AM464_RS07035 | Not Available | Negative | 1361418 - 1361981 | 21272.9 |
| type ii secretion system major pseudopilin gspg | AM464_RS07040 | Not Available | Negative | 1361985 - 1362440 | 16663.8 |
| type ii secretion system inner membrane protein gspf | AM464_RS07045 | Not Available | Negative | 1362457 - 1363680 | 44910.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




