Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system f family protein | AM464_RS06600 | Not Available | Positive | 1291575 - 1292675 | 41374.0 |
| type 4 pilus major pilin | AM464_RS06605 | Not Available | Positive | 1292725 - 1293261 | 19422.2 |
| lytic transglycosylase domain-containing protein | AM464_RS06610 | Not Available | Positive | 1293320 - 1293796 | 18118.3 |
| a24 family peptidase | AM464_RS06615 | Not Available | Positive | 1293809 - 1294459 | 23512.7 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | AM464_RS06620 | Not Available | Positive | 1294456 - 1295670 | 43801.2 |
| hypothetical protein | AM464_RS31005 | Not Available | Negative | 1296359 - 1296490 | 4682.38 |
| duf1889 family protein | AM464_RS06775 | Not Available | Negative | 1317353 - 1318030 | 25909.1 |
| aaa family atpase | AM464_RS06780 | Not Available | Negative | 1318033 - 1319700 | 62998.3 |
| dde-type integrase/transposase/recombinase | AM464_RS06785 | Not Available | Negative | 1319697 - 1321805 | 80829.0 |
| tnsa endonuclease n-terminal domain-containing protein | AM464_RS06790 | Not Available | Negative | 1321792 - 1322613 | 31258.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




