Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | AM464_RS06550 | Not Available | Negative | 1280329 - 1281318 | 38990.4 |
| trai domain-containing protein | AM464_RS06555 | Not Available | Negative | 1281372 - 1282994 | 58696.9 |
| uvrd-helicase domain-containing protein | AM464_RS06560 | Not Available | Negative | 1282987 - 1284495 | 56444.4 |
| duf1187 family protein | AM464_RS06565 | Not Available | Positive | 1285022 - 1285240 | 8044.68 |
| toxin co-regulated pilus biosynthesis q family protein | AM464_RS29830 | Not Available | Positive | 1285293 - 1286018 | 26542.8 |
| type iv pilus biogenesis protein pilm | AM464_RS06575 | Not Available | Positive | 1285982 - 1286458 | 17504.1 |
| piln family type ivb pilus formation outer membrane protein | AM464_RS06580 | Not Available | Positive | 1286648 - 1288273 | 57116.2 |
| type 4b pilus protein pilo2 | AM464_RS06585 | Not Available | Positive | 1288297 - 1289592 | 48521.5 |
| type iv pilus biogenesis protein pilp | AM464_RS06590 | Not Available | Positive | 1289582 - 1290043 | 16516.7 |
| gspe/pule family protein | AM464_RS06595 | Not Available | Positive | 1290053 - 1291573 | 56689.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




