Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yggl family protein | AM464_RS06495 | Not Available | Negative | 1271502 - 1271828 | 12881.2 |
| trna (guanosine(46)-n7)-methyltransferase trmb | AM464_RS06500 | Not Available | Negative | 1271828 - 1272547 | 27308.9 |
| a/g-specific adenine glycosylase | AM464_RS06510 | Not Available | Positive | 1272708 - 1273760 | 39208.3 |
| oxidative damage protection protein | AM464_RS06515 | Not Available | Positive | 1273788 - 1274063 | 10953.2 |
| membrane-bound lytic murein transglycosylase mltc | AM464_RS06520 | Not Available | Positive | 1274128 - 1275207 | 40114.7 |
| nucleoside permease nupg | AM464_RS06525 | Not Available | Positive | 1275409 - 1276665 | 46392.0 |
| ornithine decarboxylase | AM464_RS06530 | Not Available | Negative | 1276711 - 1278846 | 79471.5 |
| protein yqgh | AM464_RS30420 | Not Available | Negative | 1279008 - 1279091 | 3188.1 |
| duf554 domain-containing protein | AM464_RS06540 | Not Available | Positive | 1279244 - 1279951 | 24645.5 |
| Trna-phe | Not Available | Not Available | Positive | 1280057 - 1280132 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




