Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | AM464_RS05735 | Not Available | Negative | 1114623 - 1115723 | 41907.5 |
| duf423 domain-containing protein | AM464_RS05740 | Not Available | Negative | 1115716 - 1116111 | 14334.0 |
| glycine cleavage system transcriptional regulator gcva | AM464_RS05745 | Not Available | Negative | 1116130 - 1117047 | 34403.4 |
| ygdi/ygdr family lipoprotein | AM464_RS05750 | Not Available | Negative | 1117398 - 1117625 | 8174.67 |
| cysteine desulfurase csda | AM464_RS05755 | Not Available | Positive | 1117817 - 1119022 | 43278.6 |
| cysteine desulfurase sulfur acceptor subunit csde | AM464_RS05760 | Not Available | Positive | 1119022 - 1119465 | 15941.2 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | AM464_RS05765 | Not Available | Negative | 1119516 - 1120322 | 28563.6 |
| murein transglycosylase a | AM464_RS05770 | Not Available | Negative | 1120561 - 1121658 | 40412.9 |
| Trna-met | Not Available | Not Available | Positive | 1121867 - 1121943 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1121977 - 1122053 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




