Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-e crispr-associated protein cas5/casd | AM464_RS05485 | Not Available | Negative | 1054427 - 1055101 | 25280.3 |
| type i-e crispr-associated protein cas7/cse4/casc | AM464_RS05490 | Not Available | Negative | 1055104 - 1056195 | 40073.6 |
| type i-e crispr-associated protein cse2/casb | AM464_RS05495 | Not Available | Negative | 1056208 - 1056690 | 18666.6 |
| duf1889 family protein | AM464_RS05500 | Not Available | Negative | 1056683 - 1058191 | 55774.2 |
| crispr-associated helicase/endonuclease cas3 | AM464_RS30610 | Not Available | Negative | 1058606 - 1060054 | 55183.9 |
| crispr-associated helicase/endonuclease cas3 | AM464_RS30615 | Not Available | Negative | 1059988 - 1061271 | 47982.0 |
| phosphoadenosine phosphosulfate reductase | AM464_RS05515 | Not Available | Negative | 1061630 - 1062364 | 27976.4 |
| assimilatory sulfite reductase (nadph) hemoprotein subunit | AM464_RS05520 | Not Available | Negative | 1062438 - 1064150 | 63977.9 |
| nadph-dependent assimilatory sulfite reductase flavoprotein subunit | AM464_RS05525 | Not Available | Negative | 1064150 - 1065949 | 66269.3 |
| 6-carboxytetrahydropterin synthase qued | AM464_RS05530 | Not Available | Positive | 1066268 - 1066630 | 13642.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




