Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit hycf | AM464_RS05285 | Not Available | Negative | 1016744 - 1017286 | 20329.4 |
| formate hydrogenlyase subunit hyce | AM464_RS05290 | Not Available | Negative | 1017296 - 1019005 | 65012.2 |
| formate hydrogenlyase subunit hycd | AM464_RS05295 | Not Available | Negative | 1019023 - 1019946 | 33065.4 |
| formate hydrogenlyase subunit 3 | AM464_RS05300 | Not Available | Negative | 1019949 - 1021775 | 64127.2 |
| formate hydrogenlyase subunit hycb | AM464_RS05305 | Not Available | Negative | 1021772 - 1022383 | 21874.4 |
| formate hydrogenlyase regulator hyca | AM464_RS05310 | Not Available | Negative | 1022508 - 1022969 | 17627.9 |
| hydrogenase maturation nickel metallochaperone hypa | AM464_RS05315 | Not Available | Positive | 1023181 - 1023531 | 13168.9 |
| hydrogenase nickel incorporation protein hypb | AM464_RS05320 | Not Available | Positive | 1023535 - 1024407 | 31566.8 |
| hydrogenase 3 maturation protein hypc | AM464_RS05325 | Not Available | Positive | 1024398 - 1024670 | 9732.58 |
| hydrogenase formation protein hypd | AM464_RS05330 | Not Available | Positive | 1024670 - 1025791 | 41393.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




