Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease iii | AM464_RS04655 | Not Available | Negative | 903369 - 904049 | 25551.6 |
| signal peptidase i | AM464_RS04665 | Not Available | Negative | 904322 - 905296 | 35948.3 |
| translation elongation factor 4 | AM464_RS04670 | Not Available | Negative | 905312 - 907111 | 66574.1 |
| soxr-reducing system protein rsec | AM464_RS04675 | Not Available | Negative | 907309 - 907788 | 16626.3 |
| sigma-e factor regulatory protein rseb | AM464_RS04680 | Not Available | Negative | 907785 - 908741 | 35751.8 |
| anti-sigma-e factor rsea | AM464_RS04685 | Not Available | Negative | 908741 - 909391 | 24322.8 |
| rna polymerase sigma factor rpoe | AM464_RS04690 | Not Available | Negative | 909424 - 909999 | 21697.0 |
| rpoe leader peptide rsed | AM464_RS29805 | Not Available | Negative | 909996 - 910151 | 6229.83 |
| l-aspartate oxidase | AM464_RS04695 | Not Available | Positive | 910407 - 912029 | 60340.9 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase trmn | AM464_RS04700 | Not Available | Negative | 912014 - 912751 | 27257.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




