Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 subunit d | AM464_RS03920 | Not Available | Positive | 764439 - 765560 | 40605.0 |
| hydrogenase 4 membrane subunit | AM464_RS03925 | Not Available | Positive | 765572 - 766222 | 23332.9 |
| duf1889 family protein | AM464_RS30595 | Not Available | Positive | 766227 - 767807 | 56458.3 |
| hydrogenase 4 catalytic subunit hyfg | AM464_RS03940 | Not Available | Positive | 767797 - 769512 | 65044.0 |
| hydrogenase 4 subunit h | AM464_RS03945 | Not Available | Positive | 769522 - 770067 | 20100.4 |
| hydrogenase 4 catalytic subunit hyfi | AM464_RS03950 | Not Available | Positive | 770064 - 770822 | 28216.1 |
| hydrogenase 4 assembly chaperone hyfj | AM464_RS03955 | Not Available | Positive | 770815 - 771228 | 15591.8 |
| dna-binding transcriptional regulator hyfr | AM464_RS03960 | Not Available | Positive | 771258 - 773270 | 75205.5 |
| duf1889 family protein | AM464_RS03965 | Not Available | Positive | 773292 - 774141 | 30536.9 |
| ai-2e family transporter | AM464_RS03980 | Not Available | Negative | 774179 - 775240 | 39196.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




