Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna cytosine(34) acetyltransferase tmca | AM464_RS03870 | Not Available | Negative | 753473 - 755488 | 74836.6 |
| neutral zinc metallopeptidase | AM464_RS03875 | Not Available | Negative | 755503 - 756366 | 31462.0 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | AM464_RS03880 | Not Available | Negative | 756534 - 757247 | 26996.5 |
| outer membrane protein assembly factor bamc | AM464_RS03885 | Not Available | Negative | 757460 - 758494 | 36844.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | AM464_RS03890 | Not Available | Negative | 758511 - 759389 | 31271.8 |
| glycine cleavage system transcriptional repressor | AM464_RS03895 | Not Available | Positive | 759535 - 760107 | 20769.8 |
| thioredoxin-dependent thiol peroxidase | AM464_RS03900 | Not Available | Positive | 760107 - 760577 | 17634.9 |
| hydrogenase 4 subunit hyfa | AM464_RS03905 | Not Available | Positive | 760830 - 761447 | 22280.8 |
| duf1889 family protein | AM464_RS03910 | Not Available | Positive | 761447 - 763464 | 73878.5 |
| hydrogenase 4 subunit hyfc | AM464_RS03915 | Not Available | Positive | 763475 - 764422 | 34387.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




