Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1176 domain-containing protein | AM464_RS03820 | Not Available | Negative | 741363 - 742406 | 38770.5 |
| gdp-mannose pyrophosphatase nudk | AM464_RS03825 | Not Available | Negative | 742532 - 743107 | 21749.9 |
| formate-dependent uric acid utilization protein aega | AM464_RS03830 | Not Available | Negative | 743175 - 745154 | 71848.0 |
| nitrate/nitrite two-component system sensor histidine kinase narq | AM464_RS03835 | Not Available | Positive | 745360 - 747060 | 63700.7 |
| multidrug efflux rnd transporter permease acrd | AM464_RS03840 | Not Available | Positive | 747224 - 750337 | 113098.0 |
| protein ypfm | AM464_RS03845 | Not Available | Negative | 750436 - 750495 | 2408.02 |
| arsc family reductase | AM464_RS03850 | Not Available | Positive | 750876 - 751232 | 13601.3 |
| succinyl-diaminopimelate desuccinylase | AM464_RS03855 | Not Available | Positive | 751236 - 752363 | 41271.4 |
| ypfn family protein | AM464_RS03860 | Not Available | Positive | 752391 - 752591 | 8071.78 |
| esterase | AM464_RS03865 | Not Available | Negative | 752701 - 753399 | 24856.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




