Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0085 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0085 chromosome, complete genome.
Gene Summary
Adenine Count
1288202 bp
Thymine Count
1284559 bp
Guanine Count
1314856 bp
Cytosine Count
1325435 bp
Genome Length
5213052 bp
Protein-coding Genes
4663 genes
Non-Coding Genes
523 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux mfs transporter periplasmic adaptor subunit emrk | AM464_RS03360 | Not Available | Negative | 650123 - 651286 | 42587.9 |
| acid-sensing system dna-binding response regulator evga | AM464_RS03365 | Not Available | Positive | 651702 - 652316 | 22691.5 |
| acid-sensing system histidine kinase evgs | AM464_RS03370 | Not Available | Positive | 652321 - 655914 | 134811.0 |
| coa:oxalate coa-transferase | AM464_RS03375 | Not Available | Negative | 655970 - 657115 | 41673.2 |
| transporter yfdv | AM464_RS03380 | Not Available | Negative | 657189 - 658133 | 33617.9 |
| oxalyl-coa decarboxylase | AM464_RS03385 | Not Available | Negative | 658203 - 659897 | 60584.8 |
| formyl-coa transferase | AM464_RS03390 | Not Available | Negative | 659951 - 661201 | 45830.7 |
| yfdx family protein | AM464_RS03395 | Not Available | Negative | 661714 - 662349 | 22978.5 |
| colanic acid biosynthesis lipoprotein ypdi | AM464_RS03400 | Not Available | Positive | 662645 - 662920 | 10162.5 |
| yfdy family protein | AM464_RS03405 | Not Available | Negative | 662997 - 663239 | 8874.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




