Phenylobacterium parvum strain HYN0004

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Caulobacterales

Family

Caulobacteraceae

Genus

Phenylobacterium

Description

Phenylobacterium parvum strain HYN0004 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitate motility. This strain is notable for having a single replicon, indicating a streamlined genomic organization. The genomic sequence of Phenylobacterium parvum strain HYN0004 is cataloged under the accession number NZ_CP029479.1. As a member of the genus Phenylobacterium, this strain is likely involved in the degradation of aromatic compounds, which reflects its potential ecological role in bioremediation processes. The presence of flagella suggests that this bacterium can actively navigate its environment, which may enhance its ability to locate and degrade pollutants. The combination of its Gram-negative cell wall structure and motility may also contribute to its adaptability in various ecological niches, particularly those contaminated with phenolic compounds. Overall, Phenylobacterium parvum strain HYN0004 exemplifies the microbial diversity that plays a crucial role in environmental sustainability, particularly in the biotransformation of complex organic pollutants. Further studies could elucidate its specific metabolic pathways and potential applications in bioremediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusPhenylobacterium
SpeciesPhenylobacterium parvum
Strainstrain HYN0004

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Phenylobacterium parvum strain HYN0004
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phenylobacterium parvum strain HYN0004 chromosome, complete

Gene Summary

Adenine Count

425663 bp

Thymine Count

425808 bp

Guanine Count

990054 bp

Cytosine Count

987010 bp

Genome Length

2828535 bp

Protein-coding Genes

2643 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sulfite exporter taue/safe family proteinHYN04_RS03090Not AvailablePositive650821 - 65159725785.6
glutathione-dependent disulfide-bond oxidoreductaseHYN04_RS03095Not AvailableNegative651594 - 65244531650.8
sdr family oxidoreductaseHYN04_RS03100Not AvailablePositive652586 - 65358434470.0
flavin-containing monooxygenaseHYN04_RS03105Not AvailablePositive653674 - 65549167106.0
lipase family proteinHYN04_RS03110Not AvailablePositive655535 - 65674941507.5
limonene-1,2-epoxide hydrolase family proteinHYN04_RS03115Not AvailablePositive656771 - 65714214052.6
malate synthase gHYN04_RS03120Not AvailableNegative657374 - 65951876252.7
helix-turn-helix domain-containing proteinHYN04_RS03125Not AvailableNegative659636 - 66103951182.8
isocitrate lyaseHYN04_RS03130Not AvailablePositive661208 - 66280058989.0
class i sam-dependent methyltransferaseHYN04_RS03135Not AvailableNegative662869 - 66371729603.2

Displaying genes 631 – 640 of 2694 in total

Pathways

1 pathway

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.