Phenylobacterium parvum strain HYN0004

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Caulobacterales

Family

Caulobacteraceae

Genus

Phenylobacterium

Description

Phenylobacterium parvum strain HYN0004 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitate motility. This strain is notable for having a single replicon, indicating a streamlined genomic organization. The genomic sequence of Phenylobacterium parvum strain HYN0004 is cataloged under the accession number NZ_CP029479.1. As a member of the genus Phenylobacterium, this strain is likely involved in the degradation of aromatic compounds, which reflects its potential ecological role in bioremediation processes. The presence of flagella suggests that this bacterium can actively navigate its environment, which may enhance its ability to locate and degrade pollutants. The combination of its Gram-negative cell wall structure and motility may also contribute to its adaptability in various ecological niches, particularly those contaminated with phenolic compounds. Overall, Phenylobacterium parvum strain HYN0004 exemplifies the microbial diversity that plays a crucial role in environmental sustainability, particularly in the biotransformation of complex organic pollutants. Further studies could elucidate its specific metabolic pathways and potential applications in bioremediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusPhenylobacterium
SpeciesPhenylobacterium parvum
Strainstrain HYN0004

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Phenylobacterium parvum strain HYN0004
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phenylobacterium parvum strain HYN0004 chromosome, complete

Gene Summary

Adenine Count

425663 bp

Thymine Count

425808 bp

Guanine Count

990054 bp

Cytosine Count

987010 bp

Genome Length

2828535 bp

Protein-coding Genes

2643 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3526 domain-containing proteinHYN04_RS00150Not AvailableNegative32348 - 3360145370.8
abc transporter permeaseHYN04_RS00155Not AvailableNegative33598 - 3504651704.4
abc transporter atp-binding proteinHYN04_RS00160Not AvailableNegative35043 - 3577425095.4
tonb-dependent siderophore receptorHYN04_RS00165Not AvailablePositive35892 - 3802176292.6
dna helicase recqHYN04_RS00170Not AvailableNegative38025 - 3988766463.5
n-acyl-d-amino-acid deacylase family proteinHYN04_RS00175Not AvailableNegative39946 - 4169761913.7
ybjq family proteinHYN04_RS00180Not AvailablePositive41834 - 4215111080.3
dna cytosine methyltransferaseHYN04_RS00185Not AvailablePositive42198 - 4332239405.1
cysteine synthase aHYN04_RS00190Not AvailablePositive43412 - 4439234052.3
very short patch repair endonucleaseHYN04_RS00195Not AvailablePositive44397 - 4482816255.7

Displaying genes 31 – 40 of 2694 in total

Pathways

1 pathway

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.