Phenylobacterium parvum strain HYN0004

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Caulobacterales

Family

Caulobacteraceae

Genus

Phenylobacterium

Description

Phenylobacterium parvum strain HYN0004 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitate motility. This strain is notable for having a single replicon, indicating a streamlined genomic organization. The genomic sequence of Phenylobacterium parvum strain HYN0004 is cataloged under the accession number NZ_CP029479.1. As a member of the genus Phenylobacterium, this strain is likely involved in the degradation of aromatic compounds, which reflects its potential ecological role in bioremediation processes. The presence of flagella suggests that this bacterium can actively navigate its environment, which may enhance its ability to locate and degrade pollutants. The combination of its Gram-negative cell wall structure and motility may also contribute to its adaptability in various ecological niches, particularly those contaminated with phenolic compounds. Overall, Phenylobacterium parvum strain HYN0004 exemplifies the microbial diversity that plays a crucial role in environmental sustainability, particularly in the biotransformation of complex organic pollutants. Further studies could elucidate its specific metabolic pathways and potential applications in bioremediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusPhenylobacterium
SpeciesPhenylobacterium parvum
Strainstrain HYN0004

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Phenylobacterium parvum strain HYN0004
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phenylobacterium parvum strain HYN0004 chromosome, complete

Gene Summary

Adenine Count

425663 bp

Thymine Count

425808 bp

Guanine Count

990054 bp

Cytosine Count

987010 bp

Genome Length

2828535 bp

Protein-coding Genes

2643 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family nad(p)-dependent oxidoreductaseHYN04_RS08625Not AvailableNegative1802674 - 180344426042.3
fad-linked oxidase c-terminal domain-containing proteinHYN04_RS08630Not AvailablePositive1803528 - 180502752166.0
glycolate oxidase subunit glceHYN04_RS08635Not AvailablePositive1805005 - 180606936755.1
glycolate oxidase subunit glcfHYN04_RS08640Not AvailablePositive1806070 - 180728743386.7
acyl-coa dehydrogenase family proteinHYN04_RS08645Not AvailablePositive1807360 - 180857144167.2
Trna-lysNot AvailableNot AvailablePositive1808591 - 1808665Not Available
hypothetical proteinHYN04_RS08655Not AvailablePositive1808782 - 180932719045.2
trna guanosine(34) transglycosylase tgtHYN04_RS08660Not AvailableNegative1809334 - 181045840917.8
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaHYN04_RS08665Not AvailableNegative1810455 - 181150138035.5
peptidylprolyl isomeraseHYN04_RS08670Not AvailableNegative1811545 - 181200616501.6

Displaying genes 1741 – 1750 of 2694 in total

Pathways

1 pathway

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.