Phenylobacterium parvum strain HYN0004

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Caulobacterales

Family

Caulobacteraceae

Genus

Phenylobacterium

Description

Phenylobacterium parvum strain HYN0004 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitate motility. This strain is notable for having a single replicon, indicating a streamlined genomic organization. The genomic sequence of Phenylobacterium parvum strain HYN0004 is cataloged under the accession number NZ_CP029479.1. As a member of the genus Phenylobacterium, this strain is likely involved in the degradation of aromatic compounds, which reflects its potential ecological role in bioremediation processes. The presence of flagella suggests that this bacterium can actively navigate its environment, which may enhance its ability to locate and degrade pollutants. The combination of its Gram-negative cell wall structure and motility may also contribute to its adaptability in various ecological niches, particularly those contaminated with phenolic compounds. Overall, Phenylobacterium parvum strain HYN0004 exemplifies the microbial diversity that plays a crucial role in environmental sustainability, particularly in the biotransformation of complex organic pollutants. Further studies could elucidate its specific metabolic pathways and potential applications in bioremediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusPhenylobacterium
SpeciesPhenylobacterium parvum
Strainstrain HYN0004

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Phenylobacterium parvum strain HYN0004
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phenylobacterium parvum strain HYN0004 chromosome, complete

Gene Summary

Adenine Count

425663 bp

Thymine Count

425808 bp

Guanine Count

990054 bp

Cytosine Count

987010 bp

Genome Length

2828535 bp

Protein-coding Genes

2643 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipid-a-disaccharide synthaseHYN04_RS06925Not AvailableNegative1443581 - 144477142516.6
udp-2,3-diacylglucosamine diphosphataseHYN04_RS06930Not AvailableNegative1444768 - 144560429136.5
acyl-acp--udp-n-acetylglucosamine o-acyltransferaseHYN04_RS06935Not AvailableNegative1445613 - 144641328693.4
3-hydroxyacyl-acp dehydratase fabzHYN04_RS06940Not AvailableNegative1446410 - 144687416871.6
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseHYN04_RS06945Not AvailableNegative1446871 - 144789034017.0
omph family outer membrane proteinHYN04_RS06950Not AvailableNegative1447931 - 144855722113.5
outer membrane protein assembly factor bamaHYN04_RS06955Not AvailableNegative1448568 - 145093187794.8
rip metalloprotease rsepHYN04_RS06960Not AvailableNegative1450964 - 145216642634.1
1-deoxy-d-xylulose-5-phosphate reductoisomeraseHYN04_RS06965Not AvailableNegative1452169 - 145339842705.2
phosphatidate cytidylyltransferaseHYN04_RS06970Not AvailableNegative1453386 - 145417727471.2

Displaying genes 1401 – 1410 of 2694 in total

Pathways

1 pathway

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.