Flavobacterium sediminis strain MEBiC07310

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sediminis strain MEBiC07310 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility in aquatic environments. This strain is part of the genus Flavobacterium, known for its ecological role in the decomposition of organic matter in sedimentary habitats. Flavobacterium sediminis has a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and adaptability to its environment. The strain is cataloged under the accession number NZ_CP029463.1, which provides a reference for genomic and taxonomic studies. The presence of flagella suggests that this bacterium can navigate through its environment, potentially allowing it to colonize various substrates or interact with other microorganisms. This motility can enhance its ecological role, contributing to nutrient cycling in sediments. Overall, Flavobacterium sediminis strain MEBiC07310 exemplifies the adaptive strategies of bacteria in sedimentary ecosystems, where motility and efficient genetic organization may play crucial roles in survival and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sediminis
Strainstrain MEBiC07310

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sediminis strain MEBiC07310
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium sediminis strain MEBiC07310 chromosome, complete

Gene Summary

Adenine Count

1113972 bp

Thymine Count

1115436 bp

Guanine Count

604861 bp

Cytosine Count

607035 bp

Genome Length

3441304 bp

Protein-coding Genes

3180 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ix secretion system outer membrane channel protein porvDI487_RS04325Not AvailableNegative903379 - 90458143995.0
type ix secretion system sortase poruDI487_RS04330Not AvailableNegative904620 - 908489143697.0
gliding motility lipoprotein gldjDI487_RS04335Not AvailablePositive908699 - 91040264509.3
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseDI487_RS04340Not AvailablePositive910466 - 91174948390.7
transglycosylase domain-containing proteinDI487_RS04345Not AvailablePositive911767 - 91376176893.3
nadp(h)-dependent aldo-keto reductaseDI487_RS04350Not AvailableNegative913822 - 91485639010.9
ompa family proteinDI487_RS04355Not AvailableNegative914959 - 91592435485.4
exodeoxyribonuclease iiiDI487_RS04360Not AvailableNegative915953 - 91671429236.8
gnat family n-acyltransferaseDI487_RS04365Not AvailablePositive916949 - 91874269201.1
tm2 domain-containing proteinDI487_RS04370Not AvailableNegative918796 - 9190599858.13

Displaying genes 871 – 880 of 3241 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.