Flavobacterium sediminis strain MEBiC07310

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sediminis strain MEBiC07310 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility in aquatic environments. This strain is part of the genus Flavobacterium, known for its ecological role in the decomposition of organic matter in sedimentary habitats. Flavobacterium sediminis has a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and adaptability to its environment. The strain is cataloged under the accession number NZ_CP029463.1, which provides a reference for genomic and taxonomic studies. The presence of flagella suggests that this bacterium can navigate through its environment, potentially allowing it to colonize various substrates or interact with other microorganisms. This motility can enhance its ecological role, contributing to nutrient cycling in sediments. Overall, Flavobacterium sediminis strain MEBiC07310 exemplifies the adaptive strategies of bacteria in sedimentary ecosystems, where motility and efficient genetic organization may play crucial roles in survival and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sediminis
Strainstrain MEBiC07310

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sediminis strain MEBiC07310
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium sediminis strain MEBiC07310 chromosome, complete

Gene Summary

Adenine Count

1113972 bp

Thymine Count

1115436 bp

Guanine Count

604861 bp

Cytosine Count

607035 bp

Genome Length

3441304 bp

Protein-coding Genes

3180 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adenylyl-sulfate kinaseDI487_RS03730Not AvailableNegative786709 - 78730822573.1
duf2061 domain-containing proteinDI487_RS03735Not AvailableNegative787298 - 78773216992.2
3'(2'),5'-bisphosphate nucleotidase cysqDI487_RS03740Not AvailableNegative787725 - 78852830049.8
nucleotide sugar dehydrogenaseDI487_RS03745Not AvailableNegative788532 - 78980947278.7
udp-glucose 6-dehydrogenaseDI487_RS03750Not AvailableNegative789822 - 79121351081.9
sdr family oxidoreductaseDI487_RS03755Not AvailableNegative791224 - 79220436656.7
polysaccharide biosynthesis tyrosine autokinaseDI487_RS03760Not AvailableNegative792180 - 79465793980.1
polysaccharide biosynthesis/export family proteinDI487_RS03765Not AvailableNegative794665 - 79546530103.3
recombination mediator recrDI487_RS03770Not AvailableNegative795546 - 79616622888.7
sodium:solute symporterDI487_RS03775Not AvailablePositive796241 - 79768354691.6

Displaying genes 751 – 760 of 3241 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.