Flavobacterium sediminis strain MEBiC07310

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sediminis strain MEBiC07310 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility in aquatic environments. This strain is part of the genus Flavobacterium, known for its ecological role in the decomposition of organic matter in sedimentary habitats. Flavobacterium sediminis has a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and adaptability to its environment. The strain is cataloged under the accession number NZ_CP029463.1, which provides a reference for genomic and taxonomic studies. The presence of flagella suggests that this bacterium can navigate through its environment, potentially allowing it to colonize various substrates or interact with other microorganisms. This motility can enhance its ecological role, contributing to nutrient cycling in sediments. Overall, Flavobacterium sediminis strain MEBiC07310 exemplifies the adaptive strategies of bacteria in sedimentary ecosystems, where motility and efficient genetic organization may play crucial roles in survival and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sediminis
Strainstrain MEBiC07310

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sediminis strain MEBiC07310
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium sediminis strain MEBiC07310 chromosome, complete

Gene Summary

Adenine Count

1113972 bp

Thymine Count

1115436 bp

Guanine Count

604861 bp

Cytosine Count

607035 bp

Genome Length

3441304 bp

Protein-coding Genes

3180 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb-dependent receptor plug domain-containing proteinDI487_RS16375Not AvailablePositive2947838 - 294862327495.5
susc/raga family tonb-linked outer membrane proteinDI487_RS13670Not AvailablePositive2948620 - 295104690209.4
ragb/susd family nutrient uptake outer membrane proteinDI487_RS16380Not AvailablePositive2951058 - 295160020451.5
ragb/susd family nutrient uptake outer membrane proteinDI487_RS16385Not AvailablePositive2951528 - 295266141454.5
ipt/tig domain-containing proteinDI487_RS13680Not AvailablePositive2952781 - 295371634827.2
glycoside hydrolase family 27 proteinDI487_RS16390Not AvailablePositive2953789 - 295448125615.9
hypothetical proteinDI487_RS16395Not AvailablePositive2954487 - 295500820278.0
glycoside hydrolase family 5 proteinDI487_RS13690Not AvailablePositive2955013 - 295597537143.0
tonb-dependent receptorDI487_RS13695Not AvailableNegative2956058 - 295752156505.8
rhs repeat domain-containing proteinDI487_RS13700Not AvailablePositive2957628 - 295840028655.1

Displaying genes 2771 – 2780 of 3241 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.