Flavobacterium sediminis strain MEBiC07310

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sediminis strain MEBiC07310 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility in aquatic environments. This strain is part of the genus Flavobacterium, known for its ecological role in the decomposition of organic matter in sedimentary habitats. Flavobacterium sediminis has a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and adaptability to its environment. The strain is cataloged under the accession number NZ_CP029463.1, which provides a reference for genomic and taxonomic studies. The presence of flagella suggests that this bacterium can navigate through its environment, potentially allowing it to colonize various substrates or interact with other microorganisms. This motility can enhance its ecological role, contributing to nutrient cycling in sediments. Overall, Flavobacterium sediminis strain MEBiC07310 exemplifies the adaptive strategies of bacteria in sedimentary ecosystems, where motility and efficient genetic organization may play crucial roles in survival and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sediminis
Strainstrain MEBiC07310

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sediminis strain MEBiC07310
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium sediminis strain MEBiC07310 chromosome, complete

Gene Summary

Adenine Count

1113972 bp

Thymine Count

1115436 bp

Guanine Count

604861 bp

Cytosine Count

607035 bp

Genome Length

3441304 bp

Protein-coding Genes

3180 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf5683 domain-containing proteinDI487_RS11005Not AvailableNegative2393032 - 239359221457.5
parb/repb/spo0j family partition proteinDI487_RS11010Not AvailableNegative2393592 - 239448833329.1
para family proteinDI487_RS11015Not AvailableNegative2394493 - 239525727673.3
formylglycine-generating enzyme family proteinDI487_RS11020Not AvailableNegative2395420 - 239623531716.5
pas domain-containing proteinDI487_RS11025Not AvailableNegative2396371 - 239697323184.5
hypothetical proteinDI487_RS11030Not AvailablePositive2397176 - 239773621046.6
rtcb family proteinDI487_RS11035Not AvailablePositive2398089 - 239948051158.0
peptide chain release factor hDI487_RS11040Not AvailablePositive2399492 - 240018426388.7
tetratricopeptide repeat proteinDI487_RS11045Not AvailablePositive2400168 - 240070720985.4
smods domain-containing nucleotidyltransferaseDI487_RS11050Not AvailablePositive2401090 - 240203136788.1

Displaying genes 2231 – 2240 of 3241 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.