Flavobacterium sediminis strain MEBiC07310

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sediminis strain MEBiC07310 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility in aquatic environments. This strain is part of the genus Flavobacterium, known for its ecological role in the decomposition of organic matter in sedimentary habitats. Flavobacterium sediminis has a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and adaptability to its environment. The strain is cataloged under the accession number NZ_CP029463.1, which provides a reference for genomic and taxonomic studies. The presence of flagella suggests that this bacterium can navigate through its environment, potentially allowing it to colonize various substrates or interact with other microorganisms. This motility can enhance its ecological role, contributing to nutrient cycling in sediments. Overall, Flavobacterium sediminis strain MEBiC07310 exemplifies the adaptive strategies of bacteria in sedimentary ecosystems, where motility and efficient genetic organization may play crucial roles in survival and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sediminis
Strainstrain MEBiC07310

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sediminis strain MEBiC07310
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium sediminis strain MEBiC07310 chromosome, complete

Gene Summary

Adenine Count

1113972 bp

Thymine Count

1115436 bp

Guanine Count

604861 bp

Cytosine Count

607035 bp

Genome Length

3441304 bp

Protein-coding Genes

3180 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-oxalocrotonate tautomerase dmpiDI487_RS06945Not AvailableNegative1498506 - 14987097697.37
muconolactone delta-isomerase family proteinDI487_RS06950Not AvailableNegative1498721 - 149901111297.6
muconate/chloromuconate family cycloisomeraseDI487_RS06955Not AvailableNegative1499027 - 150014840316.0
mfs transporterDI487_RS06960Not AvailableNegative1500248 - 150162451009.8
hypothetical proteinDI487_RS06965Not AvailableNegative1501636 - 150296749409.7
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenaseDI487_RS06970Not AvailableNegative1502996 - 150378728564.1
mfs transporterDI487_RS06975Not AvailableNegative1503812 - 150516448706.4
benzoate 1,2-dioxygenase electron transfer component bencDI487_RS06980Not AvailableNegative1505225 - 150624137045.7
benzoate 1,2-dioxygenase small subunitDI487_RS06985Not AvailableNegative1506246 - 150673119418.5
rieske 2fe-2s domain-containing proteinDI487_RS06990Not AvailableNegative1506748 - 150808850991.8

Displaying genes 1411 – 1420 of 3241 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.