Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH5 plasmid pECO-dc1b, complete
Gene Summary
Adenine Count
50122 bp
Thymine Count
46844 bp
Guanine Count
55191 bp
Cytosine Count
50530 bp
Genome Length
202687 bp
Protein-coding Genes
224 genes
Non-Coding Genes
17 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C2U48_RS32030 | Not Available | Positive | 223717 - 226519 | 105588.0 |
| hypothetical protein | C2U48_RS32035 | Not Available | Negative | 226553 - 227041 | 17517.2 |
| hypothetical protein | C2U48_RS32040 | Not Available | Negative | 227604 - 227804 | 7644.08 |
| is5-like element is903b family transposase | C2U48_RS32045 | Not Available | Negative | 228105 - 229073 | 36656.0 |
| 1,4-alpha-glucan branching enzyme | C2U48_RS32055 | Not Available | Positive | 229445 - 231637 | 83887.5 |
| glucose-1-phosphate adenylyltransferase | C2U48_RS32060 | Not Available | Positive | 231767 - 233050 | 47976.2 |
| glycogen synthase glga | C2U48_RS32065 | Not Available | Positive | 233139 - 234572 | 52686.2 |
| glycogen phosphorylase | C2U48_RS32070 | Not Available | Positive | 234591 - 237038 | 93237.9 |
| phosphoglucomutase (alpha-d-glucose-1,6-bisphosphate-dependent) | C2U48_RS32075 | Not Available | Positive | 237152 - 238795 | 58592.5 |
| luxr c-terminal-related transcriptional regulator | C2U48_RS32080 | Not Available | Positive | 238920 - 239486 | 21271.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





