Escherichia coli strain ECONIH5

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain ECONIH5 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. This strain is motile, possessing flagella, and typically arranges itself in pairs or as singles. Economically relevant, E. coli strain ECONIH5 has a mesophilic temperature range with an optimal growth temperature of 37°C, reflecting its adaptation to host-associated habitats, particularly within warm-blooded animals. The strain is free-living but has a broad range of hosts, including Homo sapiens, Gallus gallus, Bos taurus, and various other mammals, birds, and even plants. This extensive host range indicates its ecological versatility and potential for transmission across species. E. coli strain ECONIH5 is associated with numerous health issues, notably urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as septicemia and hemolytic uremic syndrome (HUS). The strain's pathogenicity in humans is particularly concerning, as it is linked to serious health outcomes including neonatal meningitis, renal failure, and foodborne illnesses. The strain contains seven replicons and has a double membrane structure, a characteristic typical of Gram-negative bacteria. The presence of multiple replicons may contribute to its genetic adaptability, facilitating the acquisition of virulence factors. In summary, E. coli strain ECONIH5 plays a significant role in human health and disease, underscoring its importance in microbiology and public health. Its ability to thrive in diverse environments and a wide array of hosts highlights its ecological significance and challenges in disease management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain ECONIH5

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain ECONIH5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain ECONIH5 plasmid pECO-a7e8, complete

Gene Summary

Adenine Count

8756 bp

Thymine Count

8998 bp

Guanine Count

8745 bp

Cytosine Count

8537 bp

Genome Length

35036 bp

Protein-coding Genes

24 genes

Non-Coding Genes

24 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
IntegraseC2U48_RS30375Not AvailableNegative139277 - 14029038324.3
AttlNot AvailableNot AvailablePositive140387 - 140407Not Available
aada family aminoglycoside 3''-o-nucleotidyltransferaseC2U48_RS30380Not AvailablePositive140436 - 14127431552.9
Putative quaternary ammonium compound-resistance protein qaceC2U48_RS30385Not AvailablePositive141391 - 14173812332.6
sulfonamide-resistant dihydropteroate synthase sul1C2U48_RS30390Not AvailablePositive141732 - 14257130094.0
AttlNot AvailableNot AvailablePositive142577 - 142595Not Available
is91-like element iscr1 family transposaseC2U48_RS30395Not AvailablePositive142976 - 14451758501.3
Hypothetical proteinC2U48_RS30400Not AvailablePositive144850 - 14550624776.0
Putative quaternary ammonium compound-resistance protein qaceC2U48_RS30405Not AvailablePositive145503 - 1457127454.44
sulfonamide-resistant dihydropteroate synthase sul1C2U48_RS30410Not AvailablePositive145706 - 14654530128.0

Displaying genes 1 – 10 of 1065 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total