Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH5 plasmid pECO-dc1b, complete
Gene Summary
Adenine Count
50122 bp
Thymine Count
46844 bp
Guanine Count
55191 bp
Cytosine Count
50530 bp
Genome Length
202687 bp
Protein-coding Genes
224 genes
Non-Coding Genes
17 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | C2U48_RS31750 | Not Available | Negative | 181293 - 181610 | 11264.1 |
| eexn family lipoprotein | C2U48_RS31755 | Not Available | Negative | 181669 - 181932 | 9745.9 |
| lysr family transcriptional regulator | C2U48_RS31760 | Not Available | Negative | 181965 - 182870 | 33382.7 |
| efflux transporter outer membrane subunit | C2U48_RS31765 | Not Available | Negative | 182964 - 184367 | 49999.9 |
| tetr/acrr family transcriptional regulator | C2U48_RS33860 | Not Available | Positive | 184468 - 184815 | 12567.2 |
| smr family transporter | C2U48_RS31775 | Not Available | Positive | 184821 - 185018 | 6383.97 |
| duf3313 family protein | C2U48_RS31780 | Not Available | Positive | 185034 - 185654 | 22098.4 |
| mlae family abc transporter permease | C2U48_RS31785 | Not Available | Positive | 185651 - 186808 | 40820.2 |
| abc transporter atp-binding protein | C2U48_RS31790 | Not Available | Positive | 186805 - 187626 | 29376.7 |
| mlad family protein | C2U48_RS31795 | Not Available | Positive | 187718 - 188647 | 33663.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





