Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH5 plasmid pECO-dc1b, complete
Gene Summary
Adenine Count
50122 bp
Thymine Count
46844 bp
Guanine Count
55191 bp
Cytosine Count
50530 bp
Genome Length
202687 bp
Protein-coding Genes
224 genes
Non-Coding Genes
17 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer protein trbj | C2U48_RS31695 | Not Available | Negative | 171371 - 172114 | 27314.5 |
| conjugal transfer protein trbe | C2U48_RS31700 | Not Available | Negative | 172111 - 174561 | 89960.2 |
| virb3 family type iv secretion system protein | C2U48_RS31705 | Not Available | Negative | 174574 - 174843 | 9566.92 |
| trbc/virb2 family protein | C2U48_RS31710 | Not Available | Negative | 174840 - 175226 | 13292.5 |
| p-type conjugative transfer atpase trbb | C2U48_RS31715 | Not Available | Negative | 175223 - 176293 | 37711.8 |
| ribbon-helix-helix protein, copg family | C2U48_RS31720 | Not Available | Negative | 176290 - 176766 | 17810.2 |
| conjugal transfer protein trag | C2U48_RS31725 | Not Available | Negative | 176763 - 178760 | 72940.3 |
| lysr family transcriptional regulator | C2U48_RS31735 | Not Available | Positive | 179066 - 179971 | 33149.6 |
| hypothetical protein | C2U48_RS31740 | Not Available | Positive | 180253 - 180783 | 19533.7 |
| hypothetical protein | C2U48_RS31745 | Not Available | Positive | 180885 - 181064 | 7196.38 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





