Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH5 plasmid pECO-dc1b, complete
Gene Summary
Adenine Count
50122 bp
Thymine Count
46844 bp
Guanine Count
55191 bp
Cytosine Count
50530 bp
Genome Length
202687 bp
Protein-coding Genes
224 genes
Non-Coding Genes
17 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | C2U48_RS31165 | Not Available | Positive | 61591 - 64707 | 112272.0 |
| dmt family transporter | C2U48_RS31170 | Not Available | Positive | 64898 - 65233 | 11692.8 |
| duf3313 family protein | C2U48_RS31175 | Not Available | Positive | 65246 - 65863 | 22035.3 |
| patatin-like phospholipase family protein | C2U48_RS31180 | Not Available | Positive | 65980 - 67473 | 54255.2 |
| relaxase/mobilization nuclease domain-containing protein | C2U48_RS31185 | Not Available | Negative | 67466 - 69448 | 73124.9 |
| s26 family signal peptidase | C2U48_RS31195 | Not Available | Negative | 69885 - 70484 | 21068.8 |
| duf2840 domain-containing protein | C2U48_RS31200 | Not Available | Negative | 70481 - 71026 | 19936.3 |
| hypothetical protein | C2U48_RS31205 | Not Available | Negative | 71023 - 71298 | 9847.83 |
| para family partition atpase | C2U48_RS31210 | Not Available | Negative | 71295 - 71933 | 23146.1 |
| replication initiator protein a | C2U48_RS31220 | Not Available | Negative | 72199 - 73041 | 31659.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





