Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH5 plasmid pECO-dc1b, complete
Gene Summary
Adenine Count
50122 bp
Thymine Count
46844 bp
Guanine Count
55191 bp
Cytosine Count
50530 bp
Genome Length
202687 bp
Protein-coding Genes
224 genes
Non-Coding Genes
17 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virb3 family type iv secretion system protein | C2U48_RS31115 | Not Available | Negative | 52486 - 52758 | 9576.88 |
| trbc/virb2 family protein | C2U48_RS31120 | Not Available | Negative | 52755 - 53138 | 13228.4 |
| p-type conjugative transfer atpase trbb | C2U48_RS31125 | Not Available | Negative | 53135 - 54202 | 37684.0 |
| ribbon-helix-helix protein, copg family | C2U48_RS31130 | Not Available | Negative | 54199 - 54663 | 17429.8 |
| conjugal transfer protein trag | C2U48_RS31135 | Not Available | Negative | 54660 - 56675 | 73459.8 |
| eexn family lipoprotein | C2U48_RS31140 | Not Available | Negative | 56942 - 57217 | 10129.3 |
| lysr family transcriptional regulator | C2U48_RS31145 | Not Available | Negative | 57214 - 58158 | 34999.8 |
| efflux transporter outer membrane subunit | C2U48_RS31150 | Not Available | Negative | 58233 - 59657 | 51395.0 |
| tetr/acrr family transcriptional regulator | C2U48_RS31155 | Not Available | Positive | 59767 - 60402 | 22968.5 |
| efflux rnd transporter periplasmic adaptor subunit | C2U48_RS31160 | Not Available | Positive | 60453 - 61568 | 38875.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





