Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH5 plasmid pECO-dc1b, complete
Gene Summary
Adenine Count
50122 bp
Thymine Count
46844 bp
Guanine Count
55191 bp
Cytosine Count
50530 bp
Genome Length
202687 bp
Protein-coding Genes
224 genes
Non-Coding Genes
17 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Transposase | C2U48_RS28175 | Not Available | Positive | 68678 - 69997 | 48346.5 |
| Extended-spectrum beta-lactamase ctx-m-27 | C2U48_RS28180 | Not Available | Negative | 70247 - 71128 | 31117.0 |
| aaa family atpase | C2U48_RS28190 | Not Available | Negative | 71515 - 71601 | 3210.91 |
| Transposase is26 | C2U48_RS28195 | Not Available | Negative | 71653 - 72357 | 27896.9 |
| Tn5044 transposase | C2U48_RS28205 | Not Available | Positive | 72571 - 75651 | 118568.0 |
| Putative tail component k-like protein | C2U48_RS28210 | Not Available | Positive | 75681 - 75881 | 7840.97 |
| Attr | Not Available | Not Available | Positive | 75920 - 75935 | Not Available |
| hypothetical protein | C2U48_RS28215 | Not Available | Positive | 75955 - 76137 | 6768.25 |
| Gp46 | C2U48_RS33790 | Not Available | Negative | 76196 - 76546 | 13508.1 |
| trak protein | C2U48_RS33755 | Not Available | Positive | 778 - 1254 | 18026.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





