Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH5 plasmid pECO-dc1b, complete
Gene Summary
Adenine Count
50122 bp
Thymine Count
46844 bp
Guanine Count
55191 bp
Cytosine Count
50530 bp
Genome Length
202687 bp
Protein-coding Genes
224 genes
Non-Coding Genes
17 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group ii intron reverse transcriptase/maturase | C2U48_RS28870 | Not Available | Negative | 102188 - 103675 | 57706.4 |
| translesion error-prone dna polymerase v autoproteolytic subunit | C2U48_RS28880 | Not Available | Positive | 104078 - 104503 | 15728.9 |
| y-family dna polymerase | C2U48_RS28885 | Not Available | Positive | 104503 - 105774 | 47553.3 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | C2U48_RS28890 | Not Available | Positive | 105853 - 106104 | 9212.02 |
| hypothetical protein | C2U48_RS28895 | Not Available | Positive | 106158 - 106463 | 11534.0 |
| parb/repb/spo0j family plasmid partition protein | C2U48_RS28910 | Not Available | Negative | 107746 - 108717 | 35350.2 |
| plasmid-partitioning protein sopa | C2U48_RS28915 | Not Available | Negative | 108717 - 109883 | 43465.2 |
| repb family plasmid replication initiator protein | C2U48_RS28920 | Not Available | Positive | 110634 - 111644 | 38339.1 |
| propanediol dehydratase | C2U48_RS28925 | Not Available | Negative | 112342 - 112527 | 6711.13 |
| is5-like element iskpn26 family transposase | C2U48_RS28935 | Not Available | Negative | 112667 - 113647 | 37858.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





