Escherichia coli strain ECONIH5

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain ECONIH5 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. This strain is motile, possessing flagella, and typically arranges itself in pairs or as singles. Economically relevant, E. coli strain ECONIH5 has a mesophilic temperature range with an optimal growth temperature of 37°C, reflecting its adaptation to host-associated habitats, particularly within warm-blooded animals. The strain is free-living but has a broad range of hosts, including Homo sapiens, Gallus gallus, Bos taurus, and various other mammals, birds, and even plants. This extensive host range indicates its ecological versatility and potential for transmission across species. E. coli strain ECONIH5 is associated with numerous health issues, notably urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as septicemia and hemolytic uremic syndrome (HUS). The strain's pathogenicity in humans is particularly concerning, as it is linked to serious health outcomes including neonatal meningitis, renal failure, and foodborne illnesses. The strain contains seven replicons and has a double membrane structure, a characteristic typical of Gram-negative bacteria. The presence of multiple replicons may contribute to its genetic adaptability, facilitating the acquisition of virulence factors. In summary, E. coli strain ECONIH5 plays a significant role in human health and disease, underscoring its importance in microbiology and public health. Its ability to thrive in diverse environments and a wide array of hosts highlights its ecological significance and challenges in disease management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain ECONIH5

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain ECONIH5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain ECONIH5 plasmid pECO-dc1b, complete

Gene Summary

Adenine Count

50122 bp

Thymine Count

46844 bp

Guanine Count

55191 bp

Cytosine Count

50530 bp

Genome Length

202687 bp

Protein-coding Genes

224 genes

Non-Coding Genes

17 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
group ii intron reverse transcriptase/maturaseC2U48_RS28870Not AvailableNegative102188 - 10367557706.4
translesion error-prone dna polymerase v autoproteolytic subunitC2U48_RS28880Not AvailablePositive104078 - 10450315728.9
y-family dna polymeraseC2U48_RS28885Not AvailablePositive104503 - 10577447553.3
type ii toxin-antitoxin system phd/yefm family antitoxinC2U48_RS28890Not AvailablePositive105853 - 1061049212.02
hypothetical proteinC2U48_RS28895Not AvailablePositive106158 - 10646311534.0
parb/repb/spo0j family plasmid partition proteinC2U48_RS28910Not AvailableNegative107746 - 10871735350.2
plasmid-partitioning protein sopaC2U48_RS28915Not AvailableNegative108717 - 10988343465.2
repb family plasmid replication initiator proteinC2U48_RS28920Not AvailablePositive110634 - 11164438339.1
propanediol dehydrataseC2U48_RS28925Not AvailableNegative112342 - 1125276711.13
is5-like element iskpn26 family transposaseC2U48_RS28935Not AvailableNegative112667 - 11364737858.6

Displaying genes 491 – 500 of 1065 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total