Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH5 plasmid pECO-dc1b, complete
Gene Summary
Adenine Count
50122 bp
Thymine Count
46844 bp
Guanine Count
55191 bp
Cytosine Count
50530 bp
Genome Length
202687 bp
Protein-coding Genes
224 genes
Non-Coding Genes
17 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hutd family protein | C2U48_RS28820 | Not Available | Negative | 93107 - 93703 | 21401.4 |
| formimidoylglutamate deiminase | C2U48_RS28825 | Not Available | Negative | 93700 - 95073 | 49993.4 |
| histidine utilization repressor | C2U48_RS28830 | Not Available | Positive | 95314 - 96114 | 29847.5 |
| imidazolonepropionase | C2U48_RS28835 | Not Available | Positive | 96268 - 97530 | 45227.5 |
| n-formylglutamate deformylase | C2U48_RS28840 | Not Available | Positive | 97527 - 98351 | 30374.9 |
| carboxymuconolactone decarboxylase family protein | C2U48_RS28845 | Not Available | Positive | 98583 - 99260 | 24408.1 |
| is5-like element is903b family transposase | C2U48_RS28850 | Not Available | Negative | 99306 - 100274 | 36669.2 |
| plasmid stabilization protein stba | C2U48_RS28855 | Not Available | Positive | 100855 - 101241 | 14638.3 |
| hypothetical protein | C2U48_RS28860 | Not Available | Positive | 101250 - 101441 | 6844.19 |
| propanediol dehydratase | C2U48_RS28865 | Not Available | Negative | 101452 - 102035 | 21153.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





