Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH5 plasmid pECO-dc1b, complete
Gene Summary
Adenine Count
50122 bp
Thymine Count
46844 bp
Guanine Count
55191 bp
Cytosine Count
50530 bp
Genome Length
202687 bp
Protein-coding Genes
224 genes
Non-Coding Genes
17 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| propanediol dehydratase | C2U48_RS28775 | Not Available | Negative | 81880 - 82860 | 37719.5 |
| hypothetical protein | C2U48_RS32970 | Not Available | Positive | 82914 - 83225 | 11370.5 |
| iron-containing alcohol dehydrogenase family protein | C2U48_RS28780 | Not Available | Negative | 83315 - 84400 | 37592.4 |
| alpha-hydroxy acid oxidase | C2U48_RS28785 | Not Available | Negative | 84434 - 85591 | 42053.9 |
| histidinol-phosphate transaminase | C2U48_RS28790 | Not Available | Negative | 85588 - 86754 | 42020.2 |
| urocanate hydratase | C2U48_RS28795 | Not Available | Negative | 86813 - 88495 | 61145.0 |
| histidine ammonia-lyase | C2U48_RS28800 | Not Available | Negative | 88539 - 90089 | 54108.3 |
| abc transporter atp-binding protein | C2U48_RS28805 | Not Available | Negative | 90204 - 90989 | 29378.4 |
| abc transporter permease | C2U48_RS28810 | Not Available | Negative | 90989 - 91870 | 31956.1 |
| abc transporter substrate-binding protein | C2U48_RS28815 | Not Available | Negative | 91882 - 92868 | 35372.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





