Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH5 plasmid pECO-dc1b, complete
Gene Summary
Adenine Count
50122 bp
Thymine Count
46844 bp
Guanine Count
55191 bp
Cytosine Count
50530 bp
Genome Length
202687 bp
Protein-coding Genes
224 genes
Non-Coding Genes
17 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobc family replication-relaxation protein | C2U48_RS28520 | Not Available | Positive | 39570 - 40319 | 28527.6 |
| thermonuclease family protein | C2U48_RS28525 | Not Available | Positive | 40357 - 40830 | 17784.4 |
| hypothetical protein | C2U48_RS28530 | Not Available | Positive | 40887 - 41231 | 12955.3 |
| hypothetical protein | C2U48_RS28535 | Not Available | Negative | 41270 - 41503 | 8940.49 |
| para family protein | C2U48_RS28540 | Not Available | Negative | 41544 - 42191 | 22963.5 |
| sprt-like domain-containing protein | C2U48_RS28545 | Not Available | Negative | 42310 - 43092 | 28875.3 |
| type ii toxin-antitoxin system antitoxin ccda | C2U48_RS28550 | Not Available | Positive | 43492 - 43710 | 8129.54 |
| type ii toxin-antitoxin system toxin ccdb | C2U48_RS28555 | Not Available | Positive | 43712 - 44017 | 11409.7 |
| duf5710 domain-containing protein | C2U48_RS28560 | Not Available | Positive | 44035 - 44589 | 20753.6 |
| methyl-accepting chemotaxis protein | C2U48_RS28565 | Not Available | Negative | 44868 - 46550 | 60900.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





