Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH5 plasmid pECO-dc1b, complete
Gene Summary
Adenine Count
50122 bp
Thymine Count
46844 bp
Guanine Count
55191 bp
Cytosine Count
50530 bp
Genome Length
202687 bp
Protein-coding Genes
224 genes
Non-Coding Genes
17 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein | C2U48_RS28465 | Not Available | Positive | 30789 - 31862 | 38318.5 |
| hypothetical protein | C2U48_RS33280 | Not Available | Positive | 31953 - 32090 | 4710.75 |
| type iv secretion system protein | C2U48_RS28470 | Not Available | Positive | 32083 - 32766 | 25882.5 |
| p-type conjugative transfer protein virb9 | C2U48_RS28475 | Not Available | Positive | 32763 - 33671 | 33405.2 |
| virb10/trab/trbi family type iv secretion system protein | C2U48_RS28480 | Not Available | Positive | 33707 - 34957 | 45658.3 |
| p-type dna transfer atpase virb11 | C2U48_RS28485 | Not Available | Positive | 34947 - 35972 | 38952.6 |
| cag pathogenicity island cag12 family protein | C2U48_RS28490 | Not Available | Positive | 35969 - 36376 | 14988.9 |
| conjugal transfer protein | C2U48_RS28495 | Not Available | Positive | 36403 - 36708 | 10951.3 |
| dpoa decarboxylase | C2U48_RS28500 | Not Available | Positive | 36742 - 37047 | 11783.8 |
| type iv secretory system conjugative dna transfer family protein | C2U48_RS28515 | Not Available | Positive | 37825 - 39561 | 65682.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





