Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH5 plasmid pECO-dc1b, complete
Gene Summary
Adenine Count
50122 bp
Thymine Count
46844 bp
Guanine Count
55191 bp
Cytosine Count
50530 bp
Genome Length
202687 bp
Protein-coding Genes
224 genes
Non-Coding Genes
17 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| propanediol dehydratase | C2U48_RS28410 | Not Available | Negative | 24212 - 24475 | 9848.12 |
| is6-like element is26 family transposase | C2U48_RS28420 | Not Available | Negative | 24530 - 25234 | 27924.9 |
| hypothetical protein | C2U48_RS28430 | Not Available | Positive | 25491 - 25706 | 8207.88 |
| hypothetical protein | C2U48_RS28435 | Not Available | Positive | 25711 - 25929 | 7699.17 |
| hypothetical protein | C2U48_RS34065 | Not Available | Negative | 25926 - 26048 | 4384.95 |
| lytic transglycosylase domain-containing protein | C2U48_RS28440 | Not Available | Positive | 26047 - 26757 | 25912.9 |
| trbc/virb2 family protein | C2U48_RS28445 | Not Available | Positive | 26754 - 27059 | 10526.1 |
| virb3 family type iv secretion system protein | C2U48_RS28450 | Not Available | Positive | 27072 - 29810 | 103218.0 |
| type iv secretion system protein | C2U48_RS28455 | Not Available | Positive | 29828 - 30535 | 26400.4 |
| eexn family lipoprotein | C2U48_RS28460 | Not Available | Positive | 30543 - 30785 | 9129.91 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





