Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH5 plasmid pECO-dc1b, complete
Gene Summary
Adenine Count
50122 bp
Thymine Count
46844 bp
Guanine Count
55191 bp
Cytosine Count
50530 bp
Genome Length
202687 bp
Protein-coding Genes
224 genes
Non-Coding Genes
17 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C2U48_RS32975 | Not Available | Positive | 130131 - 130745 | 22681.9 |
| Putative dna repair protein | C2U48_RS34075 | Not Available | Positive | 130899 - 130976 | 2748.34 |
| Hypothetical protein | C2U48_RS29080 | Not Available | Positive | 131039 - 131377 | 12915.6 |
| duf2513 domain-containing protein | C2U48_RS29085 | Not Available | Positive | 131406 - 131834 | 16270.7 |
| Hypothetical protein | C2U48_RS29090 | Not Available | Positive | 131918 - 132085 | 6549.63 |
| Transposase | C2U48_RS29100 | Not Available | Negative | 132208 - 133176 | 36634.1 |
| Is110 family transposase | C2U48_RS29105 | Not Available | Negative | 133471 - 134496 | 37856.3 |
| Excisionase | C2U48_RS29110 | Not Available | Positive | 134553 - 134783 | 8896.77 |
| Integrase | C2U48_RS29115 | Not Available | Positive | 134761 - 135831 | 40340.4 |
| General stress protein | C2U48_RS29120 | Not Available | Positive | 135994 - 136470 | 17933.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





