Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECONIH5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain ECONIH5 plasmid pECO-dc1b, complete
Gene Summary
Adenine Count
50122 bp
Thymine Count
46844 bp
Guanine Count
55191 bp
Cytosine Count
50530 bp
Genome Length
202687 bp
Protein-coding Genes
224 genes
Non-Coding Genes
17 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trar/dksa family transcriptional regulator | C2U48_RS30675 | Not Available | Positive | 188204 - 188536 | 12559.1 |
| recombinase family protein | C2U48_RS30680 | Not Available | Negative | 188654 - 189274 | 23113.6 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | C2U48_RS30685 | Not Available | Positive | 189444 - 189704 | 9313.24 |
| type ii toxin-antitoxin system rele/pare family toxin | C2U48_RS30690 | Not Available | Positive | 189704 - 190015 | 11863.4 |
| tn3 family transposase | C2U48_RS30695 | Not Available | Positive | 190039 - 193119 | 118568.0 |
| uvrd-helicase domain-containing protein | C2U48_RS30700 | Not Available | Positive | 193157 - 194677 | 57708.1 |
| conjugal transfer protein traf | C2U48_RS30705 | Not Available | Positive | 194788 - 195828 | 39025.4 |
| conjugal transfer protein trah | C2U48_RS30710 | Not Available | Positive | 195830 - 197263 | 51262.9 |
| conjugal transfer protein trag n-terminal domain-containing protein | C2U48_RS30715 | Not Available | Positive | 197276 - 200890 | 127853.0 |
| hypothetical protein | C2U48_RS30720 | Not Available | Negative | 200928 - 201290 | 13361.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





