Streptomyces rimosus strain WT5260

Gram-positive

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces rimosus strain WT5260 is a gram-positive bacterium that inhabits soil environments. This strain is characterized by the presence of flagella, which contribute to its motility. The genome of S. rimosus WT5260 consists of a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and expression of its genes. The biological significance of S. rimosus lies in its ecological role within soil microbiomes. As a member of the Streptomyces genus, it likely participates in the decomposition of organic matter and contributes to nutrient cycling in soil ecosystems. Streptomyces species are known for their ability to produce a variety of secondary metabolites, including antibiotics, which can influence microbial community dynamics and suppress potential pathogens. The accession number NZ_CP025552.1 provides a reference for further genomic studies and exploration of the metabolic capabilities of this strain. Understanding the specific traits of S. rimosus WT5260 can offer insights into its potential applications in agriculture, biotechnology, and environmental management, particularly in the development of natural products that could benefit soil health and crop protection.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces rimosus
Strainstrain WT5260

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces rimosus strain WT5260
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces rimosus strain WT5260 plasmid unnamed, complete

Gene Summary

Adenine Count

44532 bp

Thymine Count

44516 bp

Guanine Count

100341 bp

Cytosine Count

103215 bp

Genome Length

292604 bp

Protein-coding Genes

291 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix transcriptional regulatorCTZ40_RS42180Not AvailableNegative225396 - 22666143572.8
phenylacetic acid degradation protein paanCTZ40_RS42185Not AvailableNegative226707 - 22845862267.9
tetr/acrr family transcriptional regulatorCTZ40_RS42190Not AvailableNegative228731 - 22929120362.5
mfs transporterCTZ40_RS42195Not AvailableNegative229467 - 23079544292.7
hypothetical proteinCTZ40_RS43365Not AvailablePositive231370 - 23234135690.0
hypothetical proteinCTZ40_RS43370Not AvailablePositive232406 - 2325766055.44
hypothetical proteinCTZ40_RS42215Not AvailablePositive232875 - 23324613138.8
site-specific integraseCTZ40_RS42220Not AvailablePositive233314 - 23487359364.3
hypothetical proteinCTZ40_RS42225Not AvailablePositive235009 - 23541614464.7
xre family transcriptional regulatorCTZ40_RS44855Not AvailableNegative235509 - 23660338623.6

Displaying genes 231 – 240 of 291 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.