Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya fangzhongdai |
| Strain | strain DSM 101947 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Allium cepa, Pyrus pyrifolia, Colocasia esculenta |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086499 bp
Thymine Count
1087221 bp
Guanine Count
1423061 bp
Cytosine Count
1430382 bp
Genome Length
5027163 bp
Protein-coding Genes
4248 genes
Non-Coding Genes
198 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbed family mobilization/exclusion protein | CVE23_RS22830 | Not Available | Negative | 325 - 561 | 9069.56 |
| mbeb family mobilization protein | CVE23_RS22835 | Not Available | Negative | 622 - 1107 | 17610.0 |
| relaxase/mobilization nuclease domain-containing protein | CVE23_RS23145 | Not Available | Negative | 1154 - 1576 | 16247.3 |
| plasmid mobilization protein | CVE23_RS22550 | Not Available | Negative | 1785 - 2111 | 12608.2 |
| kiwa anti-phage protein kwab-like domain-containing protein | CVE23_RS22555 | Not Available | Negative | 2352 - 3497 | 43062.9 |
| anti-phage protein kwaa | CVE23_RS22560 | Not Available | Negative | 3490 - 4146 | 24949.7 |
| replication initiation protein | CVE23_RS22565 | Not Available | Negative | 4136 - 5032 | 34059.4 |
| Ci | CVE23_RS12650 | Not Available | Negative | 2839887 - 2840729 | 29941.8 |
| hypothetical protein | CVE23_RS12655 | Not Available | Positive | 2840854 - 2841318 | 16559.5 |
| Replication gene b protein | CVE23_RS12660 | Not Available | Positive | 2841321 - 2841851 | 20852.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC9649655 |
| Bleeding canker | Causes | PMC9649655 |
| Soft rot disease | Causes | PMC9649655 |
| Bleeding canker disease | Causes | PMC9649655 |

