Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YYL |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence.
Gene Summary
Adenine Count
38842 bp
Thymine Count
39959 bp
Guanine Count
78903 bp
Cytosine Count
78650 bp
Genome Length
236354 bp
Protein-coding Genes
211 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tsup family transporter | CSW53_RS00380 | Not Available | Positive | 104736 - 105503 | 26020.8 |
| tldd/pmba family protein | CSW53_RS00385 | Not Available | Positive | 105541 - 107052 | 54183.4 |
| metallopeptidase tldd-related protein | CSW53_RS00390 | Not Available | Positive | 107049 - 108416 | 48244.8 |
| ppox class f420-dependent oxidoreductase | CSW53_RS00395 | Not Available | Negative | 108452 - 108868 | 14664.7 |
| precorrin-3b synthase | CSW53_RS00400 | Not Available | Positive | 108927 - 109751 | 28242.0 |
| dihydrolipoyl dehydrogenase family protein | CSW53_RS00405 | Not Available | Positive | 109813 - 111279 | 51061.7 |
| sdr family nad(p)-dependent oxidoreductase | CSW53_RS00410 | Not Available | Negative | 111289 - 112035 | 26322.0 |
| tigr03618 family f420-dependent ppox class oxidoreductase | CSW53_RS00415 | Not Available | Positive | 112098 - 112496 | 14413.3 |
| m24 family metallopeptidase | CSW53_RS00420 | Not Available | Negative | 112503 - 113633 | 39636.1 |
| 5'-3' exonuclease | CSW53_RS00425 | Not Available | Positive | 113661 - 114644 | 33049.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


