Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YYL |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence.
Gene Summary
Adenine Count
38842 bp
Thymine Count
39959 bp
Guanine Count
78903 bp
Cytosine Count
78650 bp
Genome Length
236354 bp
Protein-coding Genes
211 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | CSW53_RS00125 | Not Available | Negative | 28054 - 29022 | 34374.2 |
| aaa family atpase | CSW53_RS00130 | Not Available | Negative | 29047 - 29985 | 33602.3 |
| nudix hydrolase | CSW53_RS00135 | Not Available | Positive | 30116 - 30733 | 22694.9 |
| cdp-alcohol phosphatidyltransferase family protein | CSW53_RS00140 | Not Available | Positive | 30808 - 31425 | 21794.3 |
| duf881 domain-containing protein | CSW53_RS00145 | Not Available | Positive | 31422 - 32288 | 30551.9 |
| small basic family protein | CSW53_RS00150 | Not Available | Positive | 32294 - 32650 | 12448.7 |
| duf881 domain-containing protein | CSW53_RS00155 | Not Available | Positive | 32655 - 33395 | 25337.1 |
| glycine cleavage system protein gcvh | CSW53_RS00160 | Not Available | Positive | 33439 - 33843 | 14397.4 |
| glycogen accumulation regulator gara | CSW53_RS00165 | Not Available | Positive | 34018 - 34485 | 16333.7 |
| merr family transcriptional regulator | CSW53_RS00170 | Not Available | Positive | 34485 - 35222 | 26695.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


