Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YYL |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus ruber strain YYL plasmid pYYL1.1, complete sequence.
Gene Summary
Adenine Count
38842 bp
Thymine Count
39959 bp
Guanine Count
78903 bp
Cytosine Count
78650 bp
Genome Length
236354 bp
Protein-coding Genes
211 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein | CSW53_RS21450 | Not Available | Positive | 4603114 - 4604943 | 66044.1 |
| nad-dependent epimerase/dehydratase family protein | CSW53_RS21455 | Not Available | Negative | 4604950 - 4605954 | 35487.2 |
| mbl fold metallo-hydrolase | CSW53_RS21460 | Not Available | Positive | 4606080 - 4607081 | 35684.4 |
| tellurium resistance protein tera | CSW53_RS21465 | Not Available | Negative | 4607127 - 4607807 | 23745.3 |
| duf475 domain-containing protein | CSW53_RS21470 | Not Available | Negative | 4607889 - 4608977 | 38984.3 |
| terd family protein | CSW53_RS21475 | Not Available | Negative | 4609102 - 4609677 | 20401.5 |
| hypothetical protein | CSW53_RS21480 | Not Available | Positive | 4609911 - 4611032 | 40624.6 |
| hpch/hpai aldolase/citrate lyase family protein | CSW53_RS21485 | Not Available | Positive | 4611029 - 4612219 | 42900.2 |
| phosphoribosyltransferase family protein | CSW53_RS21490 | Not Available | Positive | 4612216 - 4613487 | 44881.2 |
| cysteine protease stip family protein | CSW53_RS21495 | Not Available | Positive | 4613484 - 4614590 | 39630.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


