Escherichia coli strain 4/4

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 4/4 is a Gram-negative, rod-shaped bacterium that typically appears in pairs or as single cells. This strain thrives optimally at a temperature of 37.0°C, a condition that aligns with its association with host environments, suggesting an adaptation to the warm-blooded organisms it may inhabit. As a facultative anaerobe, E. coli strain 4/4 possesses the metabolic versatility to grow in both aerobic and anaerobic conditions, allowing it to exploit a variety of niches within its host. The host-associated habitat of E. coli strain 4/4 indicates that it is likely to be found in the gastrointestinal tract of mammals, where it plays significant roles in nutrient processing and maintaining gut homeostasis. The ability to survive in different oxygen conditions enhances its ecological adaptability, facilitating colonization in diverse microenvironments within the host. Overall, the traits of E. coli strain 4/4 underscore its potential as a model organism for studying host-microbe interactions, particularly in understanding how this strain might contribute to or influence the microbial balance within the gastrointestinal system. Further research could elucidate its specific roles and interactions in the host environment, providing insights into microbial ecology and the dynamics of gut health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain 4/4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 4/4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Gene Summary

Adenine Count

1066 bp

Thymine Count

983 bp

Guanine Count

994 bp

Cytosine Count

1044 bp

Genome Length

4087 bp

Protein-coding Genes

2 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
replication initiation proteinCRT43_RS27455Not Available-272 - 97927275.0
relaxase accessory protein mobcCRT43_RS27465Not Available-1511 - 17659445.69
hypothetical proteinCRT43_RS27425Not Available+506 - 90415333.6
replication initiation proteinCRT43_RS27430Not Available-1108 - 202234633.2
hypothetical proteinCRT43_RS27440Not Available+3759 - 39688127.76
hypothetical proteinCRT43_RS27445Not Available-4034 - 456719826.8
is1-like element is1b family transposaseCRT43_RS25665Not Available-307 - 4415095.41
is1 family transposaseCRT43_RS25670Not Available-459 - 115626590.4
is5-like element iskpn26 family transposaseCRT43_RS25675Not Available-1311 - 229137830.6
type-f conjugative transfer system pilin assembly protein trafCRT43_RS25680Not Available-2421 - 316427989.7

Displaying genes 1 – 10 of 302 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites