Escherichia coli strain 4/4

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 4/4 is a Gram-negative, rod-shaped bacterium characterized as a facultative anaerobe, which allows it to thrive in both aerobic and anaerobic environments. This strain is motile due to the presence of flagella and typically exists in pairs or singles. It operates optimally at 37°C, fitting within the mesophilic temperature range. The strain is known to have six replicons and is surrounded by two membranes, indicating its complex cellular structure. E. coli strain 4/4 is free-living and is associated with a diverse array of hosts, including Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and various other vertebrates and invertebrates, including plants such as Solanum lycopersicum (tomato) and Brassica oleracea var. italica (broccoli). Health effects linked to this strain are extensive and include urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and several forms of colitis. It has been implicated in severe conditions such as hemolytic uremic syndrome (HUS), septicemia, and even colorectal cancer. The ecological insight from the data indicates that E. coli strain 4/4 plays a significant role in the health of its host organisms and can be a pathogen in both humans and animals. Its ability to inhabit a wide range of hosts and cause various diseases highlights its importance in both clinical microbiology and public health. Understanding the pathogenicity and host associations of this strain can inform strategies for disease prevention and management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain 4/4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 4/4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Gene Summary

Adenine Count

1066 bp

Thymine Count

983 bp

Guanine Count

994 bp

Cytosine Count

1044 bp

Genome Length

4087 bp

Protein-coding Genes

2 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conjugal transfer protein trbdCRT43_RS25735Not AvailableNegative11929 - 1224010894.2
conjugal transfer pilus-stabilizing protein trapCRT43_RS25740Not AvailableNegative12227 - 1279321358.7
f-type conjugal transfer pilus assembly protein trabCRT43_RS25745Not AvailableNegative12783 - 1423451060.4
type-f conjugative transfer system secretin trakCRT43_RS25750Not AvailableNegative14234 - 1496225591.6
type iv conjugative transfer system protein traeCRT43_RS25755Not AvailableNegative14949 - 1551521225.6
type iv conjugative transfer system protein tralCRT43_RS25760Not AvailableNegative15537 - 1584811890.6
type iv conjugative transfer system pilin traaCRT43_RS25765Not AvailableNegative15853 - 1621512843.4
conjugal transfer relaxosome protein trayCRT43_RS25770Not AvailableNegative16249 - 164769072.72
pas domain-containing proteinCRT43_RS25775Not AvailableNegative16564 - 1724126487.2
conjugal transfer relaxosome dna-binding protein tramCRT43_RS25780Not AvailableNegative17375 - 1775814477.3

Displaying genes 21 – 30 of 302 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total