Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | YT1_RS05790 | Not Available | Positive | 1016370 - 1017563 | 43340.1 |
| acyl-coa dehydrogenase family protein | YT1_RS05795 | Not Available | Positive | 1017560 - 1018657 | 37588.6 |
| amp-binding protein | YT1_RS05800 | Not Available | Positive | 1018695 - 1020353 | 59409.0 |
| acyl-coa thioesterase | YT1_RS05805 | Not Available | Positive | 1020370 - 1021221 | 31405.9 |
| had family hydrolase | YT1_RS05810 | Not Available | Positive | 1021218 - 1021871 | 22721.1 |
| nucleotidyltransferase | YT1_RS27470 | Not Available | Positive | 1021900 - 1022532 | 22453.5 |
| bon domain-containing protein | YT1_RS27475 | Not Available | Positive | 1022529 - 1022795 | 9698.26 |
| metallophosphoesterase | YT1_RS05825 | Not Available | Positive | 1022792 - 1023505 | 25380.0 |
| nadp-dependent oxidoreductase | YT1_RS05830 | Not Available | Negative | 1023552 - 1024568 | 35711.5 |
| rna-guided endonuclease insq/tnpb family protein | YT1_RS05835 | Not Available | Negative | 1024768 - 1025931 | 43633.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


