Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | YT1_RS05740 | Not Available | Positive | 1006420 - 1007301 | 31289.6 |
| acetyl-coa c-acetyltransferase | YT1_RS05745 | Not Available | Negative | 1007443 - 1008633 | 39913.8 |
| coa transferase subunit b | YT1_RS05750 | Not Available | Negative | 1008682 - 1009344 | 23017.7 |
| coa transferase subunit a | YT1_RS05755 | Not Available | Negative | 1009341 - 1010108 | 26615.8 |
| iclr family transcriptional regulator | YT1_RS05760 | Not Available | Positive | 1010309 - 1011091 | 28453.8 |
| phosphotransferase family protein | YT1_RS05765 | Not Available | Negative | 1011088 - 1012119 | 37241.1 |
| alpha/beta fold hydrolase | YT1_RS05770 | Not Available | Positive | 1012273 - 1013082 | 28163.5 |
| spoiie family protein phosphatase | YT1_RS05775 | Not Available | Positive | 1013082 - 1014344 | 45024.6 |
| enoyl-coa hydratase-related protein | YT1_RS05780 | Not Available | Positive | 1014477 - 1015316 | 29874.4 |
| phosphotransferase family protein | YT1_RS05785 | Not Available | Positive | 1015303 - 1016337 | 37697.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


