Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YT1_RS05695 | Not Available | Positive | 996802 - 997335 | 18892.2 |
| hypothetical protein | YT1_RS05700 | Not Available | Positive | 997332 - 997910 | 20233.6 |
| response regulator | YT1_RS05705 | Not Available | Negative | 997915 - 998439 | 19142.6 |
| trehalose-6-phosphate synthase | YT1_RS05710 | Not Available | Negative | 998436 - 999926 | 55351.5 |
| hypothetical protein | YT1_RS27110 | Not Available | Negative | 999975 - 1000148 | 6180.17 |
| abc transporter transmembrane domain-containing protein | YT1_RS05715 | Not Available | Positive | 1000306 - 1002033 | 58717.0 |
| abc transporter atp-binding protein | YT1_RS05720 | Not Available | Positive | 1002030 - 1003796 | 60372.4 |
| alpha/beta fold hydrolase | YT1_RS05725 | Not Available | Positive | 1003906 - 1004706 | 28492.2 |
| nad(p)-dependent oxidoreductase | YT1_RS05730 | Not Available | Negative | 1004771 - 1005421 | 22476.8 |
| eama family transporter | YT1_RS05735 | Not Available | Negative | 1005418 - 1006341 | 31054.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


