Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | YT1_RS05645 | Not Available | Positive | 986139 - 986324 | 6656.73 |
| 3-oxoacyl-acp reductase | YT1_RS05650 | Not Available | Positive | 986444 - 987424 | 33321.2 |
| mlae family abc transporter permease | YT1_RS05655 | Not Available | Positive | 987885 - 988649 | 26257.9 |
| mlae family abc transporter permease | YT1_RS05660 | Not Available | Positive | 988670 - 989518 | 29347.3 |
| mce family protein | YT1_RS05665 | Not Available | Positive | 989523 - 990701 | 41503.7 |
| mce family protein | YT1_RS05670 | Not Available | Positive | 990759 - 991778 | 36579.4 |
| mce family protein | YT1_RS05675 | Not Available | Positive | 991775 - 992833 | 37220.8 |
| mce family protein | YT1_RS05680 | Not Available | Positive | 992830 - 994158 | 46477.4 |
| mce family protein | YT1_RS05685 | Not Available | Positive | 994155 - 995390 | 43104.3 |
| mce family protein | YT1_RS05690 | Not Available | Positive | 995387 - 996802 | 49911.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


