Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | strain YC-YT1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838143 bp
Thymine Count
839814 bp
Guanine Count
1998922 bp
Cytosine Count
1992973 bp
Genome Length
5669852 bp
Protein-coding Genes
5139 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonase/enoyl-coa hydratase family protein | YT1_RS05595 | Not Available | Negative | 972617 - 973450 | 28897.8 |
| acyl-coa synthetase | YT1_RS05600 | Not Available | Positive | 973528 - 975183 | 59882.8 |
| nad(p)h-dependent flavin oxidoreductase | YT1_RS05605 | Not Available | Positive | 975195 - 976307 | 38828.4 |
| cytochrome p450 | YT1_RS05610 | Not Available | Positive | 976318 - 977511 | 43623.0 |
| multicopper oxidase domain-containing protein | YT1_RS05615 | Not Available | Negative | 977519 - 980086 | 88644.0 |
| hypothetical protein | YT1_RS05620 | Not Available | Negative | 980083 - 981174 | 37081.6 |
| helix-turn-helix transcriptional regulator | YT1_RS05625 | Not Available | Negative | 981171 - 981890 | 25037.9 |
| long-chain-fatty-acid--coa ligase | YT1_RS05630 | Not Available | Negative | 981960 - 983582 | 57564.4 |
| acyl-coa dehydrogenase family protein | YT1_RS05635 | Not Available | Negative | 983642 - 984757 | 39250.0 |
| acyl-coa dehydrogenase family protein | YT1_RS05640 | Not Available | Negative | 984781 - 985959 | 43101.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


